Some bacteria sniff their way through life

Some bacteria sniff their way through life

E. coli bacteria • Photo by Janice Haney Carr, National Escherichia, Shigella, Vibrio Reference Unit at CDC, USCDCP on Pixnio

Originally published 12 April 1993

Bac­te­ria have noses.

Well, not noses exact­ly, but scent-sen­si­tive spots where a nose should be, up front, head­ing into the wind.

Janine Mad­dock and Lucille Shapiro, biol­o­gists at the Stan­ford Uni­ver­si­ty School of Med­i­cine, announced this dis­cov­ery in a [1993] issue of Sci­ence. Their report is titled “Polar Loca­tion of the Chemore­cep­tor Com­plex in the Escherichia coli Cell.” That’s sci­ence-speak for “some bac­te­ria have noses.”

This news comes as a sur­prise to those of us who imag­ined bac­te­ria as blobs of fea­ture­less pro­to­plasm. Escherichia coli (E. coli for short) is one of the com­mon­est bac­te­ria. A zil­lion of them live in my diges­tive track. As far as I knew, they were micro­scop­ic sausages of pro­tein with a twist of DNA, a lumpen-pro­le­tari­at of the germ world.

Now it seems they sniff their way about like blood­hounds. With nutri­ent-detec­tors prob­ing ahead, and whip­like appendages churn­ing behind, they wig­gle through my gut snap­ping up food. The lit­tle whip­per­snap­pers have a more — ah, sophis­ti­cat­ed — lifestyle than I ever imagined.

It pleas­es me to know that my E. coli know where they’re going. I’ve always had an affec­tion for the amoe­boid flo­ra and fau­na that inhab­it my body. Some­where I read that 10 per­cent of my dry body weight is made up of invis­i­ble organ­isms — bac­te­ria most­ly — that are along for the ride. It’s nice to know they are more than dead weight.

Con­sid­er an open stretch of my skin, a shoul­der blade, for instance. A close exam­i­na­tion might reveal a mil­lion bac­te­ria per square cen­time­ter, hap­pi­ly liv­ing out their lives on plan­et Homo sapi­ens, eat­ing, drink­ing, mov­ing about, repro­duc­ing every 20 min­utes or so.

In dark, damp parts of my body — the mouth, the throat — a more plen­ti­ful food sup­ply sup­ports a pop­u­la­tion den­si­ty a thou­sand times greater than on the deserts of the skin. These fel­lows, too, make their liv­ing in con­so­nance with mine. They don’t dare cause too much dam­age or they might kill their host.

Most numer­ous of all are my intesti­nal pop­u­la­tion of E. coli. There are enough E. coli bac­te­ria inside me to reach from Boston to San Fran­cis­co if laid end to end. And now that we know they have noses, we know which end is which.

E. coli bac­te­ria took up res­i­dence in my body not long after I was born. They are most­ly harm­less. In fact, they do some good. In exchange for food and shel­ter they make Vit­a­min K, which clots blood, and oth­er use­ful chem­i­cals. They com­pete against path­o­gen­ic bac­te­ria that can cause seri­ous infection.

The rela­tion­ship between me and my E. coli is called com­men­sal, which means lit­er­al­ly “eat­ing at the same table.” As long as we are eat­ing at the same table, I wish them noses. Eyes and ears would do them lit­tle good in that dark, muf­fled place, but a nose can be an asset.

Mad­dock and Shapiro write: “The sub­cel­lu­lar local­iza­tion of the chemo­taxis pro­teins may reflect a gen­er­al mech­a­nism by which the bac­te­r­i­al cell sequesters dif­fer­ent regions of the cell for spe­cial­ized func­tions.” Uh, yeah. What that means, I think, is that E. coli isn’t the sim­ple lit­tle blob we thought it was.

In fact, sev­er­al lines of research have late­ly sug­gest­ed a sur­pris­ing degree of struc­ture in bac­te­ria. They are much, much more than a pinch of jel­ly in a sack. They sniff. They scoot. They com­mu­ni­cate. They might even remember.

A new kind of bac­te­ria, recent­ly dis­cov­ered in the intes­tine of a Red Sea fish, is big enough to be seen with the naked eye — about as long as the peri­od at the end of this sen­tence is wide. Sci­en­tists had assumed that bac­te­ria could­n’t be so big because they did­n’t have the kind of inter­nal plumb­ing that could pump nutri­ents through­out their bod­ies. Well, appar­ent­ly there’s more going on inside than we imagined.

Noses and cir­cu­la­to­ry sys­tems — of sorts. These lit­tle guys are pos­i­tive­ly intri­cate. It’s nice to have them at my table.

Biol­o­gist Lynn Mar­gulis has sug­gest­ed that the com­men­sal rela­tion­ship between me and my E. coli is the stuff of evo­lu­tion. Rela­tion­ships that begin as com­men­sal may become sym­bi­ot­ic, and even­tu­al­ly two col­lab­o­rat­ing crea­tures can become inte­gral com­po­nents of a new self. If evo­lu­tion con­tin­ues for anoth­er few mil­lion years, says Mar­gulis, the bac­te­ria pro­duc­ing vit­a­mins in our intestines may become part of our own cells. An aggre­gate of spe­cial­ized cells may become an organ.

It is not pre­pos­ter­ous to pos­tu­late,” she says, “that the very con­scious­ness that enables us to probe the work­ings of our cells may have been born of the con­cert­ed capac­i­ties of mil­lions of microbes that evolved sym­bi­ot­i­cal­ly to become the human brain.”

Accord­ing to Mar­gulis, this kind of cre­ative sym­bio­sis has been a dri­ving force of evolution.

If she is right, then our entire bod­ies are col­lec­tive soci­eties of bac­te­ria that over hun­dreds of mil­lions of years pooled their DNA and lost the capac­i­ty to live on their own. Who knows, maybe our human noses had their ori­gin in pha­lanx­es of bac­te­ria with “polar chemore­cep­tor com­plex­es” — noses — sniff­ing togeth­er for greater efficiency.

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